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  • Top cofit genes for CSW01_05045 from Vibrio cholerae E7946 ATCC 55056

    dipeptide/tripeptide permease DtpA
    SEED: Di/tripeptide permease DtpA
    KEGG: proton-dependent oligopeptide transporter, POT family

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_11905 thymidine phosphorylase no 0.50
    2 CSW01_03270 hypothetical protein no 0.49
    3 CSW01_06320 competence/damage-inducible protein A no 0.49
    4 CSW01_03880 HTH-type transcriptional regulator IscR 0.33 0.47
    5 CSW01_17835 hypothetical protein no 0.45
    6 CSW01_19070 LysR family transcriptional regulator no 0.45
    7 CSW01_10745 DUF2897 domain-containing protein no 0.44
    8 CSW01_02470 LuxR family transcriptional regulator no 0.43
    9 CSW01_18070 FAD-dependent oxidoreductase no 0.43
    10 CSW01_09030 MarR family transcriptional regulator no 0.43
    11 CSW01_13330 pilus assembly protein PilM no 0.43
    12 CSW01_10200 DUF3413 domain-containing protein 0.53 0.43
    13 CSW01_11670 NADH:ubiquinone reductase (Na(+)-transporting) subunit B no 0.43
    14 CSW01_08165 carboxynorspermidine synthase no 0.43
    15 CSW01_04765 hypothetical protein no 0.41
    16 CSW01_13845 hypothetical protein no 0.41
    17 CSW01_09475 thiamine kinase no 0.41
    18 CSW01_13670 DNA-directed RNA polymerase subunit omega 0.45 0.40
    19 CSW01_07550 GntR family transcriptional regulator no 0.40
    20 CSW01_18940 EamA family transporter no 0.40

    Or look for negative cofitness