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  • Top cofit genes for CSW01_04980 from Vibrio cholerae E7946 ATCC 55056

    NfeD family protein
    SEED: Putative activity regulator of membrane protease YbbK
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_02815 tRNA pseudouridine(13) synthase TruD 0.19 0.50
    2 CSW01_15870 type II toxin-antitoxin system RelE/ParE family toxin no 0.49
    3 CSW01_05450 phosphatase no 0.49
    4 CSW01_08475 DUF2750 domain-containing protein no 0.49
    5 CSW01_19540 chemotaxis protein CheW no 0.47
    6 CSW01_10130 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.47 0.47
    7 CSW01_11335 23S rRNA pseudouridine(2604) synthase RluF no 0.46
    8 CSW01_00115 hypothetical protein no 0.46
    9 CSW01_08925 sialic acid-binding protein no 0.45
    10 CSW01_12350 methyl-accepting chemotaxis protein no 0.44
    11 CSW01_16125 hypothetical protein no 0.44
    12 CSW01_14705 DUF3316 domain-containing protein no 0.44
    13 CSW01_06410 hypothetical protein 0.27 0.44
    14 CSW01_10215 histone deacetylase 0.30 0.44
    15 CSW01_04815 YitT family protein no 0.43
    16 CSW01_11955 endonuclease no 0.43
    17 CSW01_08415 efflux RND transporter periplasmic adaptor subunit 0.67 0.43
    18 CSW01_05855 hypothetical protein no 0.43
    19 CSW01_02845 cysteine synthase CysM 0.44 0.42
    20 CSW01_05370 YbaB/EbfC family nucleoid-associated protein no 0.42

    Or look for negative cofitness