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  • Top cofit genes for CSW01_04790 from Vibrio cholerae E7946 ATCC 55056

    TetR family transcriptional regulator
    SEED: Capsular polysaccharide synthesis enzyme CpsB

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_18695 energy transducer TonB no 0.53
    2 CSW01_06655 outer membrane protein OmpV no 0.53
    3 CSW01_05015 selenoprotein W-like protein no 0.53
    4 CSW01_00110 hypothetical protein no 0.47
    5 CSW01_08960 DNA repair protein RadC no 0.46
    6 CSW01_17275 large conductance mechanosensitive channel protein MscL no 0.46
    7 CSW01_04070 LysR family transcriptional regulator no 0.45
    8 CSW01_12560 acetolactate synthase small subunit no 0.44
    9 CSW01_16945 DUF1097 domain-containing protein no 0.44
    10 CSW01_02950 sodium ion-translocating decarboxylase subunit beta no 0.44
    11 CSW01_03420 MarR family transcriptional regulator no 0.43
    12 CSW01_14360 DUF1566 domain-containing protein no 0.43
    13 CSW01_01055 hypothetical protein no 0.43
    14 CSW01_17965 arginine transporter permease subunit ArtM no 0.43
    15 CSW01_08140 DUF1415 domain-containing protein no 0.42
    16 CSW01_18520 linear amide C-N hydrolase no 0.42
    17 CSW01_14905 flavohemoprotein no 0.42
    18 CSW01_18545 non-hemolytic enterotoxin lytic component L1 no 0.42
    19 CSW01_16205 DUF3465 domain-containing protein no 0.42
    20 CSW01_16230 DUF645 domain-containing protein no 0.42

    Or look for negative cofitness