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  • Top cofit genes for CSW01_04775 from Vibrio cholerae E7946 ATCC 55056

    polymerase
    SEED: RbmD, similar to Lipid A core - O-antigen ligase and related enzymes

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_04990 hypothetical protein no 0.72
    2 CSW01_08985 6-phospho-beta-glucosidase no 0.70
    3 CSW01_15075 hemolysin no 0.67
    4 CSW01_00340 thiamine phosphate synthase no 0.67
    5 CSW01_04965 chitoporin no 0.61
    6 CSW01_07665 bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/molybdopterin molybdotransferase MoeA no 0.60
    7 CSW01_02945 oxaloacetate decarboxylase subunit alpha no 0.58
    8 CSW01_05315 RNA polymerase subunit sigma no 0.58
    9 CSW01_04320 type 4 prepilin-like proteins leader peptide-processing enzyme no 0.56
    10 CSW01_04440 type IV pilin no 0.55
    11 CSW01_17885 hypothetical protein no 0.54
    12 CSW01_19165 hypothetical protein no 0.53
    13 CSW01_12715 ribonuclease no 0.53
    14 CSW01_03460 ribosomal-protein-alanine N-acetyltransferase no 0.53
    15 CSW01_15660 cell shape-determining protein MreC no 0.53
    16 CSW01_00025 membrane protein insertion efficiency factor YidD no 0.53
    17 CSW01_04780 hypothetical protein no 0.52
    18 CSW01_10405 Mn2+/Zn2+ABC transporter ATP-binding protein no 0.52
    19 CSW01_12895 gamma-glutamylcyclotransferase no 0.52
    20 CSW01_18025 ACP phosphodiesterase no 0.50

    Or look for negative cofitness