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  • Top cofit genes for CSW01_04610 from Vibrio cholerae E7946 ATCC 55056

    GGDEF domain-containing protein
    SEED: GGDEF domain family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_11335 23S rRNA pseudouridine(2604) synthase RluF no 0.65
    2 CSW01_17355 D-3-phosphoglycerate dehydrogenase no 0.62
    3 CSW01_16075 hypothetical protein no 0.61
    4 CSW01_02650 IS5/IS1182 family transposase no 0.60
    5 CSW01_05005 epimerase no 0.58
    6 CSW01_01405 DNA-binding protein HU-alpha no 0.58
    7 CSW01_02420 glutaminase no 0.58
    8 CSW01_06780 homogentisate 1,2-dioxygenase no 0.58
    9 CSW01_10705 flagellin E no 0.58
    10 CSW01_10480 histidine kinase no 0.57
    11 CSW01_14040 chromosome partitioning protein ParB no 0.57
    12 CSW01_12750 BolA family transcriptional regulator no 0.57
    13 CSW01_18250 co-chaperone GroES no 0.56
    14 CSW01_19260 methyl-accepting chemotaxis protein no 0.56
    15 CSW01_10535 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC no 0.56
    16 CSW01_13875 adenosine deaminase no 0.54
    17 CSW01_09135 PTS fructose transporter subunit IIA no 0.53
    18 CSW01_04520 aminobenzoyl-glutamate transporter no 0.53
    19 CSW01_10135 hypothetical protein no 0.53
    20 CSW01_10040 hypothetical protein no 0.53

    Or look for negative cofitness