• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for CSW01_04590 from Vibrio cholerae E7946 ATCC 55056

    transcriptional regulator GcvA
    SEED: Glycine cleavage system transcriptional activator GcvA
    KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_00395 ribosomal RNA small subunit methyltransferase J 0.75 0.70
    2 CSW01_03100 TetR/AcrR family transcriptional regulator no 0.69
    3 CSW01_14530 SulP family inorganic anion transporter 0.45 0.68
    4 CSW01_03860 protein translocase subunit SecD 0.32 0.61
    5 CSW01_03525 phosphoenolpyruvate-protein phosphotransferase PtsP 0.80 0.60
    6 CSW01_02210 DUF3971 domain-containing protein 0.66 0.60
    7 CSW01_04900 magnesium and cobalt efflux protein CorC 0.83 0.59
    8 CSW01_01750 transporter no 0.59
    9 CSW01_05060 cation:proton antiporter no 0.59
    10 CSW01_18300 LysR family transcriptional regulator no 0.58
    11 CSW01_02060 methionine synthase 0.46 0.57
    12 CSW01_02100 RNase E specificity factor CsrD 0.61 0.57
    13 CSW01_03465 GGDEF-domain containing protein no 0.57
    14 CSW01_18990 ATP-dependent protease 0.23 0.56
    15 CSW01_10200 DUF3413 domain-containing protein 0.76 0.56
    16 CSW01_17095 protein acetyltransferase 0.16 0.56
    17 CSW01_09380 PrkA family serine protein kinase 0.27 0.55
    18 CSW01_04640 methionine ABC transporter permease 0.33 0.55
    19 CSW01_00790 vitamin B12 transporter BtuB 0.99 0.53
    20 CSW01_00290 gamma carbonic anhydrase family protein 0.55 0.53

    Or look for negative cofitness