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  • Top cofit genes for CSW01_04555 from Vibrio cholerae E7946 ATCC 55056

    tRNA pseudouridine(65) synthase TruC
    SEED: tRNA pseudouridine synthase C (EC 4.2.1.70)
    KEGG: tRNA pseudouridine synthase C

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_06285 vitamin B12 ABC transporter permease BtuC no 0.61
    2 CSW01_10140 hypothetical protein no 0.56
    3 CSW01_06940 hypothetical protein no 0.53
    4 CSW01_15775 DUF1349 domain-containing protein no 0.49
    5 CSW01_18375 GGDEF domain-containing protein 0.41 0.47
    6 CSW01_18915 DUF3612 domain-containing protein no 0.46
    7 CSW01_09785 septum site-determining protein MinC no 0.45
    8 CSW01_11635 DNA polymerase IV 0.50 0.43
    9 CSW01_00780 hypothetical protein no 0.43
    10 CSW01_14680 aminotransferase no 0.43
    11 CSW01_00160 ATP-dependent protease 0.34 0.43
    12 CSW01_17260 noncanonical pyrimidine nucleotidase, YjjG family no 0.43
    13 CSW01_18405 ABC transporter permease no 0.43
    14 CSW01_12695 lactate dehydrogenase no 0.42
    15 CSW01_11525 hypothetical protein no 0.42
    16 CSW01_06980 MFS transporter no 0.42
    17 CSW01_01745 EamA family transporter no 0.42
    18 CSW01_13265 nuclease no 0.42
    19 CSW01_17450 hypothetical protein no 0.42
    20 CSW01_13280 phosphoglycolate phosphatase no 0.41

    Or look for negative cofitness