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  • Top cofit genes for CSW01_04425 from Vibrio cholerae E7946 ATCC 55056

    general secretion pathway protein GspH
    SEED: Type IV fimbrial biogenesis protein FimT
    KEGG: type IV fimbrial biogenesis protein FimT

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_06635 transporter no 0.83
    2 CSW01_01390 mannose-6-phosphate isomerase, class I no 0.82
    3 CSW01_05280 uridine kinase no 0.81
    4 CSW01_10390 ferrous iron transport protein A no 0.81
    5 CSW01_09970 peptide-methionine (R)-S-oxide reductase no 0.81
    6 CSW01_01300 sugar ABC transporter no 0.81
    7 CSW01_11710 transcriptional regulator no 0.81
    8 CSW01_00945 XRE family transcriptional regulator no 0.81
    9 CSW01_01255 acyltransferase no 0.81
    10 CSW01_00215 potassium uptake protein TrkH no 0.80
    11 CSW01_01270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase no 0.80
    12 CSW01_02840 DNA mismatch repair protein MutS no 0.80
    13 CSW01_01295 ABC transporter permease no 0.80
    14 CSW01_06025 phosphoribosylaminoimidazolesuccinocarboxamide synthase no 0.80
    15 CSW01_01190 glycosyltransferase family 2 protein no 0.80
    16 CSW01_06075 DUF3581 domain-containing protein no 0.80
    17 CSW01_01260 polysaccharide deacetylase no 0.80
    18 CSW01_01420 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase no 0.79
    19 CSW01_03470 peptide chain release factor 3 no 0.79
    20 CSW01_04650 D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase no 0.79

    Or look for negative cofitness