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  • Top cofit genes for CSW01_04320 from Vibrio cholerae E7946 ATCC 55056

    type 4 prepilin-like proteins leader peptide-processing enzyme
    SEED: TCP pilin signal peptidase, TcpA processing
    KEGG: toxin co-regulated pilus biosynthesis protein J

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_04235 hypothetical protein no 0.72
    2 CSW01_01205 wavE lipopolysaccharide synthesis family protein no 0.71
    3 CSW01_04345 accessory colonization factor AcfA no 0.71
    4 CSW01_09465 NAD(P)/FAD-dependent oxidoreductase no 0.70
    5 CSW01_04230 peptidase M66 no 0.69
    6 CSW01_16450 sulfate transporter subunit no 0.68
    7 CSW01_01235 glycosyl transferase no 0.68
    8 CSW01_17345 prepilin peptidase no 0.67
    9 CSW01_04275 toxin coregulated pilus biosynthesis protein Q no 0.67
    10 CSW01_10405 Mn2+/Zn2+ABC transporter ATP-binding protein no 0.65
    11 CSW01_10280 heme exporter protein C no 0.63
    12 CSW01_09055 DUF2787 domain-containing protein no 0.62
    13 CSW01_09040 primosomal protein no 0.62
    14 CSW01_09075 hypothetical protein no 0.62
    15 CSW01_08900 N-acetylneuraminate epimerase no 0.62
    16 CSW01_04310 pilus assembly protein no 0.61
    17 CSW01_02470 LuxR family transcriptional regulator no 0.61
    18 CSW01_14055 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG no 0.61
    19 CSW01_06385 peptidase no 0.61
    20 CSW01_17885 hypothetical protein no 0.60

    Or look for negative cofitness