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  • Top cofit genes for CSW01_04315 from Vibrio cholerae E7946 ATCC 55056

    TCP pilus virulence regulatory protein
    SEED: TCP pilus virulence regulatory protein ToxT, transcription activator
    KEGG: AraC family transcriptional regulator, TCP pilus virulence regulatory protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_03160 DNA/RNA nuclease SfsA no 0.57
    2 CSW01_04310 pilus assembly protein no 0.51
    3 CSW01_13000 peptidylprolyl isomerase no 0.51
    4 CSW01_17045 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta no 0.48
    5 CSW01_14775 Na+/H+ antiporter subunit D no 0.48
    6 CSW01_04325 methyl-accepting chemotaxis protein no 0.48
    7 CSW01_07770 MotA/TolQ/ExbB proton channel family protein no 0.46
    8 CSW01_01500 50S ribosomal protein L11 methyltransferase no 0.46
    9 CSW01_06080 histidine ammonia-lyase no 0.46
    10 CSW01_06225 cytidine deaminase no 0.46
    11 CSW01_04290 toxin coregulated pilus biosynthesis protein D no 0.45
    12 CSW01_04320 type 4 prepilin-like proteins leader peptide-processing enzyme no 0.45
    13 CSW01_11845 beta-galactosidase no 0.45
    14 CSW01_07260 type I secretion system permease/ATPase no 0.45
    15 CSW01_04345 accessory colonization factor AcfA no 0.44
    16 CSW01_05265 methionine--tRNA ligase no 0.43
    17 CSW01_13340 DNA-binding transcriptional regulator OxyR no 0.43
    18 CSW01_07475 glutaredoxin family protein no 0.42
    19 CSW01_07785 ABC transporter substrate-binding protein no 0.42
    20 CSW01_19010 methyl-accepting chemotaxis protein no 0.42

    Or look for negative cofitness