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  • Top cofit genes for CSW01_04310 from Vibrio cholerae E7946 ATCC 55056

    pilus assembly protein
    SEED: Toxin co-regulated pilus biosynthesis protein F, putative outer membrane channel for TcpA extrusion
    KEGG: toxin co-regulated pilus biosynthesis protein F

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_04230 peptidase M66 no 0.74
    2 CSW01_04235 hypothetical protein no 0.74
    3 CSW01_16450 sulfate transporter subunit no 0.72
    4 CSW01_04280 toxin coregulated pilus biosynthesis outer membrane protein C no 0.71
    5 CSW01_04225 aldehyde dehydrogenase no 0.71
    6 CSW01_04185 nuclease no 0.63
    7 CSW01_14055 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG no 0.63
    8 CSW01_01235 glycosyl transferase no 0.62
    9 CSW01_04345 accessory colonization factor AcfA no 0.62
    10 CSW01_07495 NAD-glutamate dehydrogenase no 0.62
    11 CSW01_04270 toxin coregulated pilus biosynthesis protein B no 0.62
    12 CSW01_04320 type 4 prepilin-like proteins leader peptide-processing enzyme no 0.61
    13 CSW01_09035 IclR family transcriptional regulator no 0.61
    14 CSW01_09465 NAD(P)/FAD-dependent oxidoreductase no 0.60
    15 CSW01_07770 MotA/TolQ/ExbB proton channel family protein no 0.59
    16 CSW01_02150 MSHA biogenesis protein MshB no 0.59
    17 CSW01_00470 twin-arginine translocase subunit TatC no 0.59
    18 CSW01_08900 N-acetylneuraminate epimerase no 0.57
    19 CSW01_17060 DUF2861 domain-containing protein no 0.57
    20 CSW01_17345 prepilin peptidase no 0.57

    Or look for negative cofitness