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  • Top cofit genes for CSW01_04280 from Vibrio cholerae E7946 ATCC 55056

    toxin coregulated pilus biosynthesis outer membrane protein C
    SEED: Toxin co-regulated pilus biosynthesis protein C, outer membrane protein
    KEGG: toxin co-regulated pilus biosynthesis outer membrane protein C

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_04325 methyl-accepting chemotaxis protein no 0.74
    2 CSW01_04310 pilus assembly protein no 0.71
    3 CSW01_04270 toxin coregulated pilus biosynthesis protein B no 0.68
    4 CSW01_04225 aldehyde dehydrogenase no 0.67
    5 CSW01_04230 peptidase M66 no 0.66
    6 CSW01_04235 hypothetical protein no 0.62
    7 CSW01_04350 accessory colonization factor AcfD no 0.60
    8 CSW01_07495 NAD-glutamate dehydrogenase no 0.60
    9 CSW01_04240 peptidase no 0.60
    10 CSW01_12240 single-stranded-DNA-specific exonuclease RecJ no 0.57
    11 CSW01_10340 MinD/ParA family protein no 0.56
    12 CSW01_07195 cytochrome biogenesis protein no 0.55
    13 CSW01_07210 hypothetical protein no 0.54
    14 CSW01_10420 succinyl-CoA ligase subunit beta no 0.52
    15 CSW01_10445 succinate dehydrogenase, hydrophobic membrane anchor protein no 0.51
    16 CSW01_04330 accessory colonization factor AcfC no 0.51
    17 CSW01_11930 peroxide stress protein YaaA 0.32 0.50
    18 CSW01_07205 copper-translocating P-type ATPase no 0.50
    19 CSW01_16330 DUF2971 domain-containing protein no 0.49
    20 CSW01_04320 type 4 prepilin-like proteins leader peptide-processing enzyme no 0.49

    Or look for negative cofitness