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  • Top cofit genes for CSW01_04175 from Vibrio cholerae E7946 ATCC 55056

    SWIM zinc finger domain-containing protein
    SEED: FIG01202538: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_14365 methyl-accepting chemotaxis protein no 0.54
    2 CSW01_12030 glutamate synthase large subunit no 0.49
    3 CSW01_04865 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.26 0.49
    4 CSW01_05700 DUF2878 domain-containing protein no 0.47
    5 CSW01_19625 tRNA cytosine(34) acetyltransferase TmcA no 0.47
    6 CSW01_07230 cytochrome-c oxidase, cbb3-type subunit I no 0.45
    7 CSW01_02495 16S rRNA (uracil(1498)-N(3))-methyltransferase no 0.45
    8 CSW01_19480 HlyD family type I secretion periplasmic adaptor subunit no 0.44
    9 CSW01_03790 phosphate ABC transporter, permease protein PstA no 0.44
    10 CSW01_19440 sodium/proline symporter PutP no 0.44
    11 CSW01_04090 sensor histidine kinase no 0.42
    12 CSW01_17130 Zn-dependent protease no 0.42
    13 CSW01_19520 chemotaxis response regulator protein-glutamate methylesterase no 0.42
    14 CSW01_07195 cytochrome biogenesis protein no 0.41
    15 CSW01_18590 LysR family transcriptional regulator no 0.41
    16 CSW01_01070 ABC transporter ATP-binding protein no 0.40
    17 CSW01_02270 malate dehydrogenase no 0.39
    18 CSW01_13160 DUF3413 domain-containing protein no 0.39
    19 CSW01_01155 DNA repair protein RadC no 0.38
    20 CSW01_15125 iron(III) ABC transporter ATP-binding protein no 0.38

    Or look for negative cofitness