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  • Top cofit genes for CSW01_04150 from Vibrio cholerae E7946 ATCC 55056

    RNA methyltransferase
    SEED: tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)
    KEGG: RNA methyltransferase, TrmH family

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_11555 riboflavin synthase no 0.86
    2 CSW01_01820 N-acetylmuramoyl-L-alanine amidase no 0.86
    3 CSW01_12005 aerobic respiration two-component sensor histidine kinase ArcB no 0.85
    4 CSW01_05925 tryptophan synthase subunit alpha 0.66 0.84
    5 CSW01_11560 riboflavin biosynthesis protein RibD no 0.84
    6 CSW01_02175 MSHA biogenesis protein MshP no 0.84
    7 CSW01_10020 ROK family protein no 0.84
    8 CSW01_06380 GTP cyclohydrolase II no 0.84
    9 CSW01_04010 vibriobactin biosynthesis isochorismate synthase no 0.84
    10 CSW01_12885 fructose 1,6-bisphosphatase no 0.83
    11 CSW01_06395 iron-regulated protein A no 0.83
    12 CSW01_07175 DUF2987 domain-containing protein no 0.83
    13 CSW01_04040 ABC transporter ATP-binding protein no 0.83
    14 CSW01_10265 c-type cytochrome biogenesis protein CcmF no 0.82
    15 CSW01_05730 inosine/guanosine kinase no 0.82
    16 CSW01_06735 methylisocitrate lyase no 0.82
    17 CSW01_01555 ATP-dependent RNA helicase RhlB no 0.81
    18 CSW01_09655 SELO family protein 0.61 0.81
    19 CSW01_13285 ribulose-phosphate 3-epimerase no 0.81
    20 CSW01_03695 ribosomal large subunit pseudouridine synthase D 0.57 0.81

    Or look for negative cofitness