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  • Top cofit genes for CSW01_04125 from Vibrio cholerae E7946 ATCC 55056

    citrate (pro-3S)-lyase subunit beta
    SEED: Citrate lyase beta chain (EC 4.1.3.6)
    KEGG: citrate lyase subunit beta / citryl-CoA lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_13525 DNA-binding transcriptional regulator CytR no 0.78
    2 CSW01_06715 tripartite tricarboxylate transporter permease no 0.73
    3 CSW01_01300 sugar ABC transporter no 0.72
    4 CSW01_06925 hypothetical protein no 0.72
    5 CSW01_07470 ABC transporter ATP-binding protein 0.36 0.72
    6 CSW01_02505 SprT family protein 0.47 0.71
    7 CSW01_13495 MATE family efflux transporter no 0.71
    8 CSW01_02515 transketolase no 0.70
    9 CSW01_01295 ABC transporter permease 0.34 0.70
    10 CSW01_01420 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase 0.33 0.69
    11 CSW01_01250 polymerase no 0.69
    12 CSW01_01060 ABC transporter ATP-binding protein no 0.69
    13 CSW01_09555 tRNA-(ms[2]io[6]A)-hydroxylase no 0.69
    14 CSW01_16025 hypothetical protein no 0.68
    15 CSW01_08445 ABC transporter substrate-binding protein 0.45 0.68
    16 CSW01_13690 two-component system sensor histidine kinase EnvZ no 0.68
    17 CSW01_04045 vibriobactin biosynthesis 4'-phosphopantetheinyl transferase VibD no 0.68
    18 CSW01_01360 sugar transferase 0.45 0.68
    19 CSW01_01285 perosamine synthetase no 0.67
    20 CSW01_01315 NAD-dependent alcohol dehydrogenase no 0.67

    Or look for negative cofitness