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  • Top cofit genes for CSW01_03950 from Vibrio cholerae E7946 ATCC 55056

    hypothetical protein
    SEED: Mlr7403 protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_12260 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD 0.66 0.68
    2 CSW01_12875 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.69 0.67
    3 CSW01_11705 MFS transporter 0.62 0.58
    4 CSW01_02500 deoxyribonuclease no 0.54
    5 CSW01_12920 DUF2607 domain-containing protein no 0.49
    6 CSW01_14325 peptidase 0.62 0.48
    7 CSW01_04100 oxaloacetate decarboxylase subunit alpha no 0.47
    8 CSW01_18275 diaminobutyrate--2-oxoglutarate transaminase no 0.44
    9 CSW01_06405 murein L,D-transpeptidase 0.46 0.44
    10 CSW01_15335 glycine cleavage system protein H 0.47 0.41
    11 CSW01_11565 transcriptional regulator NrdR 0.48 0.40
    12 CSW01_15350 glycine cleavage system aminomethyltransferase T 0.52 0.39
    13 CSW01_15955 DUF3709 domain-containing protein no 0.39
    14 CSW01_10025 pyruvate kinase 0.56 0.39
    15 CSW01_09680 phosphatidate cytidylyltransferase 0.49 0.39
    16 CSW01_05855 hypothetical protein no 0.39
    17 CSW01_18855 maltose/maltodextrin ABC transporter substrate-binding protein MalE no 0.39
    18 CSW01_04215 IS481 family transposase ISVch1 no 0.39
    19 CSW01_07695 N-acetylglucosamine kinase 0.57 0.39
    20 CSW01_03785 phosphate ABC transporter permease 0.64 0.38

    Or look for negative cofitness