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  • Top cofit genes for CSW01_03880 from Vibrio cholerae E7946 ATCC 55056

    HTH-type transcriptional regulator IscR
    SEED: Iron-sulfur cluster regulator IscR
    KEGG: Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_03270 hypothetical protein no 0.72
    2 CSW01_03505 hypothetical protein no 0.68
    3 CSW01_13670 DNA-directed RNA polymerase subunit omega no 0.63
    4 CSW01_18530 hypothetical protein no 0.63
    5 CSW01_15210 L-ascorbate 6-phosphate lactonase no 0.60
    6 CSW01_09340 hypothetical protein no 0.60
    7 CSW01_07800 sn-glycerol-3-phosphate import ATP-binding protein UgpC no 0.59
    8 CSW01_15305 XRE family transcriptional regulator no 0.59
    9 CSW01_16585 acetyltransferase no 0.58
    10 CSW01_00425 universal stress protein B 0.67 0.58
    11 CSW01_12075 RNA-directed DNA polymerase no 0.58
    12 CSW01_12610 3-isopropylmalate dehydratase small subunit no 0.58
    13 CSW01_18940 EamA family transporter no 0.58
    14 CSW01_18970 DUF2850 domain-containing protein no 0.58
    15 CSW01_02755 glutamyl-tRNA amidotransferase no 0.58
    16 CSW01_03070 hemolysin 0.59 0.57
    17 CSW01_08660 PurR family transcriptional regulator no 0.57
    18 CSW01_12530 YecA family protein 0.70 0.57
    19 CSW01_04150 RNA methyltransferase no 0.56
    20 CSW01_05455 MFS transporter no 0.56

    Or look for negative cofitness