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  • Top cofit genes for CSW01_03850 from Vibrio cholerae E7946 ATCC 55056

    tRNA guanosine(34) transglycosylase Tgt
    SEED: tRNA-guanine transglycosylase (EC 2.4.2.29)
    KEGG: queuine tRNA-ribosyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_06720 tripartite tricarboxylate transporter TctB family protein no 0.51
    2 CSW01_11335 23S rRNA pseudouridine(2604) synthase RluF no 0.48
    3 CSW01_11155 NAD-dependent DNA ligase no 0.48
    4 CSW01_09640 C4-dicarboxylate ABC transporter permease no 0.48
    5 CSW01_18230 agmatinase 0.88 0.48
    6 CSW01_10795 NAD(P)H:quinone oxidoreductase 0.70 0.48
    7 CSW01_14215 DUF839 domain-containing protein 0.33 0.47
    8 CSW01_07080 methyl-accepting chemotaxis protein no 0.47
    9 CSW01_19535 methyl-accepting chemotaxis protein no 0.47
    10 CSW01_13875 adenosine deaminase no 0.47
    11 CSW01_11955 endonuclease no 0.46
    12 CSW01_02610 hypothetical protein no 0.46
    13 CSW01_08750 1-aminocyclopropane-1-carboxylate deaminase no 0.45
    14 CSW01_09320 amino acid ABC transporter permease 0.36 0.45
    15 CSW01_17700 sigma-54-dependent Fis family transcriptional regulator no 0.45
    16 CSW01_07875 cytochrome BD ubiquinol oxidase subunit II 0.36 0.45
    17 CSW01_11285 Fe3+-citrate ABC transporter substrate-binding protein no 0.44
    18 CSW01_18285 4a-hydroxytetrahydrobiopterin dehydratase no 0.44
    19 CSW01_10040 hypothetical protein no 0.44
    20 CSW01_18690 heme anaerobic degradation radical SAM methyltransferase ChuW/HutW no 0.44

    Or look for negative cofitness