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  • Top cofit genes for CSW01_03680 from Vibrio cholerae E7946 ATCC 55056

    bifunctional chorismate mutase/prephenate dehydratase
    SEED: Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51)
    KEGG: chorismate mutase / prephenate dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_03655 murein transglycosylase no 0.74
    2 CSW01_03670 biofilm architecture maintenance protein MbaA no 0.72
    3 CSW01_01750 transporter no 0.72
    4 CSW01_18055 hypothetical protein 0.59 0.70
    5 CSW01_02060 methionine synthase 0.60 0.70
    6 CSW01_03630 sensor histidine kinase no 0.69
    7 CSW01_00685 lysophospholipase 0.80 0.68
    8 CSW01_17095 protein acetyltransferase no 0.67
    9 CSW01_03695 ribosomal large subunit pseudouridine synthase D no 0.67
    10 CSW01_02090 helix-turn-helix transcriptional regulator no 0.67
    11 CSW01_02455 YggS family pyridoxal phosphate enzyme 0.67 0.67
    12 CSW01_03525 phosphoenolpyruvate-protein phosphotransferase PtsP no 0.67
    13 CSW01_08850 hypothetical protein no 0.67
    14 CSW01_01820 N-acetylmuramoyl-L-alanine amidase no 0.67
    15 CSW01_01810 tRNA epoxyqueuosine(34) reductase QueG no 0.66
    16 CSW01_12605 3-isopropylmalate dehydratase large subunit 0.98 0.66
    17 CSW01_03215 ABC transporter ATP-binding protein no 0.66
    18 CSW01_12200 ribosomal RNA small subunit methyltransferase H no 0.66
    19 CSW01_05490 L-threonylcarbamoyladenylate synthase no 0.66
    20 CSW01_06390 thiol oxidoreductase 0.46 0.65

    Or look for negative cofitness