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  • Top cofit genes for CSW01_03555 from Vibrio cholerae E7946 ATCC 55056

    transcriptional regulator
    SEED: Transcriptional activator HlyU

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_17820 hypothetical protein no 0.68
    2 CSW01_18145 resolvase no 0.63
    3 CSW01_19215 glucosamine-6-phosphate deaminase no 0.62
    4 CSW01_02090 helix-turn-helix transcriptional regulator no 0.62
    5 CSW01_12860 thiamine/thiamine pyrophosphate ABC transporter permease ThiP no 0.62
    6 CSW01_06735 methylisocitrate lyase no 0.62
    7 CSW01_16900 twin-arginine translocase TatA/TatE family subunit no 0.62
    8 CSW01_08285 SgrR family transcriptional regulator no 0.61
    9 CSW01_11225 flagellar basal body rod protein FlgB no 0.60
    10 CSW01_03465 GGDEF-domain containing protein no 0.59
    11 CSW01_05060 cation:proton antiporter no 0.59
    12 CSW01_01555 ATP-dependent RNA helicase RhlB 0.51 0.59
    13 CSW01_15305 XRE family transcriptional regulator no 0.59
    14 CSW01_16185 DUF3265 domain-containing protein no 0.58
    15 CSW01_09340 hypothetical protein no 0.58
    16 CSW01_18200 ABC transporter substrate-binding protein no 0.58
    17 CSW01_17025 GGDEF domain-containing protein no 0.58
    18 CSW01_05950 anthranilate synthase component I no 0.58
    19 CSW01_19365 LysR family transcriptional regulator no 0.58
    20 CSW01_10655 flagellar hook-basal body complex protein FliE no 0.58

    Or look for negative cofitness