Top cofit genes for CSW01_03550 from Vibrio cholerae E7946 ATCC 55056

transcriptional activator protein NhaR
SEED: Transcriptional activator NhaR
KEGG: LysR family transcriptional regulator, transcriptional activator of nhaA

Rank	Hit	Name	Description	Conserved?	Cofitness
1	CSW01_03765		two-component system sensor histidine kinase PhoR	no	0.59
2	CSW01_06220		AEC family transporter	no	0.55
3	CSW01_15095		protease	no	0.54
4	CSW01_04710		UDP-N-acetyl-D-mannosamine dehydrogenase	no	0.53
5	CSW01_00520		flagellar basal body-associated protein FliL	no	0.52
6	CSW01_04600		flap endonuclease Xni	no	0.52
7	CSW01_03605		sodium:proton antiporter	no	0.52
8	CSW01_00440		DNA recombination protein RmuC	0.30	0.51
9	CSW01_18300		LysR family transcriptional regulator	no	0.51
10	CSW01_01745		EamA family transporter	no	0.50
11	CSW01_15235		DUF2861 domain-containing protein	no	0.50
12	CSW01_12700		RNA pseudouridine synthase	0.44	0.50
13	CSW01_17395		hypothetical protein	no	0.50
14	CSW01_06100		histidine utilization repressor	no	0.49
15	CSW01_03705		chaperone protein ClpB	0.64	0.49
16	CSW01_00665		DTW domain-containing protein	no	0.49
17	CSW01_14690		Crp/Fnr family transcriptional regulator	no	0.48
18	CSW01_03845		hypothetical protein	no	0.48
19	CSW01_03650		energy-dependent translational throttle protein EttA	0.51	0.48
20	CSW01_17230		putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	no	0.47

Or look for negative cofitness