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  • Top cofit genes for CSW01_03500 from Vibrio cholerae E7946 ATCC 55056

    sigma-54-dependent Fis family transcriptional regulator
    SEED: Transcriptional regulator VpsR

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_09760 chitinase no 0.55
    2 CSW01_06130 DNA polymerase II no 0.53
    3 CSW01_15775 DUF1349 domain-containing protein no 0.51
    4 CSW01_06655 outer membrane protein OmpV no 0.49
    5 CSW01_08385 sodium-dependent transporter no 0.48
    6 CSW01_12350 methyl-accepting chemotaxis protein no 0.48
    7 CSW01_09280 DUF2057 domain-containing protein no 0.46
    8 CSW01_16260 prevent-host-death family protein no 0.46
    9 CSW01_01870 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA no 0.46
    10 CSW01_01710 Rsd/AlgQ family anti-sigma factor 0.47 0.45
    11 CSW01_06820 ribosomal RNA large subunit methyltransferase I no 0.45
    12 CSW01_17070 YoaH family protein no 0.44
    13 CSW01_06555 methyl-accepting chemotaxis protein no 0.44
    14 CSW01_18185 DEAD/DEAH box family ATP-dependent RNA helicase no 0.44
    15 CSW01_06420 DUF2982 domain-containing protein no 0.43
    16 CSW01_08910 N-acetylneuraminate lyase no 0.43
    17 CSW01_05370 YbaB/EbfC family nucleoid-associated protein no 0.42
    18 CSW01_02685 hypothetical protein no 0.41
    19 CSW01_04490 DUF533 domain-containing protein no 0.41
    20 CSW01_03480 tRNA (adenosine(37)-N6)-methyltransferase TrmM no 0.41

    Or look for negative cofitness