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  • Top cofit genes for CSW01_03475 from Vibrio cholerae E7946 ATCC 55056

    ATP-dependent RNA helicase SrmB
    SEED: ATP-dependent RNA helicase SrmB
    KEGG: ATP-dependent RNA helicase SrmB

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_11275 NADPH-dependent ferric siderophore reductase no 0.78
    2 CSW01_06075 DUF3581 domain-containing protein no 0.77
    3 CSW01_00215 potassium uptake protein TrkH no 0.77
    4 CSW01_07835 catalase-peroxidase no 0.76
    5 CSW01_11270 non-ribosomal peptide synthetase no 0.76
    6 CSW01_01255 acyltransferase no 0.76
    7 CSW01_09145 PTS fructose transporter subunit IIA no 0.76
    8 CSW01_01270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 0.85 0.76
    9 CSW01_08445 ABC transporter substrate-binding protein 0.73 0.76
    10 CSW01_01390 mannose-6-phosphate isomerase, class I no 0.76
    11 CSW01_11710 transcriptional regulator no 0.75
    12 CSW01_09415 DNA internalization-related competence protein ComEC/Rec2 no 0.75
    13 CSW01_01830 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.78 0.75
    14 CSW01_01280 GDP-mannose 4,6-dehydratase 0.77 0.75
    15 CSW01_01320 acyl-CoA reductase no 0.75
    16 CSW01_01290 rfbG protein no 0.75
    17 CSW01_01305 acyl carrier protein no 0.74
    18 CSW01_01310 long-chain fatty acid--CoA ligase no 0.74
    19 CSW01_01285 perosamine synthetase no 0.74
    20 CSW01_01345 glycosyl transferase family 1 0.80 0.74

    Or look for negative cofitness