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  • Top cofit genes for CSW01_03425 from Vibrio cholerae E7946 ATCC 55056

    MATE family efflux transporter
    SEED: Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_03820 hydrogen peroxide-inducible genes activator 0.46 0.64
    2 CSW01_05380 YkgJ family cysteine cluster protein no 0.60
    3 CSW01_05755 histidinol-phosphate transaminase no 0.59
    4 CSW01_06075 DUF3581 domain-containing protein no 0.59
    5 CSW01_03435 protease no 0.59
    6 CSW01_12925 DUF2796 domain-containing protein no 0.58
    7 CSW01_01735 peptidase M23 0.27 0.57
    8 CSW01_13495 MATE family efflux transporter no 0.57
    9 CSW01_01520 acetyl-coenzyme A synthetase no 0.57
    10 CSW01_05590 DNA-binding protein VF530 no 0.57
    11 CSW01_11270 non-ribosomal peptide synthetase no 0.56
    12 CSW01_07530 ABC transporter ATP-binding protein no 0.55
    13 CSW01_09670 bifunctional diguanylate cyclase/phosphodiesterase no 0.55
    14 CSW01_08550 hypothetical protein no 0.55
    15 CSW01_01195 ADP-heptose--LPS heptosyltransferase I 0.25 0.54
    16 CSW01_10470 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) no 0.54
    17 CSW01_08445 ABC transporter substrate-binding protein 0.30 0.54
    18 CSW01_12065 LysR family transcriptional regulator no 0.54
    19 CSW01_08195 ABC transporter ATP-binding protein no 0.54
    20 CSW01_00280 shikimate dehydrogenase no 0.54

    Or look for negative cofitness