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Cofit
Protein
Homologs
Top cofit genes for CSW01_03285 from
Vibrio cholerae E7946 ATCC 55056
AI-2E family transporter
SEED: Predicted permease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_08565
hypothetical protein
0.22
0.62
2
CSW01
_17610
signal transduction histidine-protein kinase/phosphatase UhpB
no
0.51
3
CSW01
_04525
DUF188 domain-containing protein
no
0.47
4
CSW01
_05815
glutaredoxin
no
0.47
5
CSW01
_08370
ABC transporter ATP-binding protein
no
0.46
6
CSW01
_02380
tRNA-Asn
no
0.45
7
CSW01
_00910
ABC transporter ATP-binding protein
no
0.45
8
CSW01
_05315
RNA polymerase subunit sigma
no
0.45
9
CSW01
_04640
methionine ABC transporter permease
0.26
0.44
10
CSW01
_19135
MarR family transcriptional regulator
no
0.43
11
CSW01
_19115
AraC family transcriptional regulator
no
0.43
12
CSW01
_14775
Na+/H+ antiporter subunit D
0.21
0.43
13
CSW01
_03930
bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN
no
0.43
14
CSW01
_18260
hypothetical protein
no
0.42
15
CSW01
_06485
PTS lactose/cellobiose transporter subunit IIA
no
0.42
16
CSW01
_03835
acetoin utilization protein AcuB
no
0.42
17
CSW01
_15040
ATP-binding protein
no
0.41
18
CSW01
_04890
hypothetical protein
no
0.41
19
CSW01
_17315
DNA-binding protein
no
0.40
20
CSW01
_14945
2-hydroxyacid dehydrogenase
no
0.40
Or look for
negative cofitness