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  • Top cofit genes for CSW01_03285 from Vibrio cholerae E7946 ATCC 55056

    AI-2E family transporter
    SEED: Predicted permease

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_08565 hypothetical protein 0.22 0.62
    2 CSW01_17610 signal transduction histidine-protein kinase/phosphatase UhpB no 0.51
    3 CSW01_04525 DUF188 domain-containing protein no 0.47
    4 CSW01_05815 glutaredoxin no 0.47
    5 CSW01_08370 ABC transporter ATP-binding protein no 0.46
    6 CSW01_02380 tRNA-Asn no 0.45
    7 CSW01_00910 ABC transporter ATP-binding protein no 0.45
    8 CSW01_05315 RNA polymerase subunit sigma no 0.45
    9 CSW01_04640 methionine ABC transporter permease 0.26 0.44
    10 CSW01_19135 MarR family transcriptional regulator no 0.43
    11 CSW01_19115 AraC family transcriptional regulator no 0.43
    12 CSW01_14775 Na+/H+ antiporter subunit D 0.21 0.43
    13 CSW01_03930 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN no 0.43
    14 CSW01_18260 hypothetical protein no 0.42
    15 CSW01_06485 PTS lactose/cellobiose transporter subunit IIA no 0.42
    16 CSW01_03835 acetoin utilization protein AcuB no 0.42
    17 CSW01_15040 ATP-binding protein no 0.41
    18 CSW01_04890 hypothetical protein no 0.41
    19 CSW01_17315 DNA-binding protein no 0.40
    20 CSW01_14945 2-hydroxyacid dehydrogenase no 0.40

    Or look for negative cofitness