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  • Top cofit genes for CSW01_03280 from Vibrio cholerae E7946 ATCC 55056

    16S rRNA methyltransferase
    SEED: Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52)
    KEGG: ribosomal RNA small subunit methyltransferase C

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_00765 Si-specific NAD(P)(+) transhydrogenase no 0.82
    2 CSW01_10265 c-type cytochrome biogenesis protein CcmF no 0.81
    3 CSW01_10270 cytochrome c-type biogenesis protein CcmE 0.48 0.81
    4 CSW01_02450 pyrroline-5-carboxylate reductase 0.36 0.80
    5 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.17 0.80
    6 CSW01_01485 transcriptional regulator 0.29 0.79
    7 CSW01_05950 anthranilate synthase component I 0.70 0.79
    8 CSW01_12005 aerobic respiration two-component sensor histidine kinase ArcB 0.72 0.79
    9 CSW01_11190 flagellar P-ring protein 0.50 0.78
    10 CSW01_01915 bacterioferritin-associated ferredoxin no 0.78
    11 CSW01_09750 molybdopterin guanine dinucleotide-containing S/N-oxide reductase no 0.78
    12 CSW01_06395 iron-regulated protein A no 0.77
    13 CSW01_13285 ribulose-phosphate 3-epimerase no 0.77
    14 CSW01_11560 riboflavin biosynthesis protein RibD no 0.77
    15 CSW01_11265 flagellar basal-body protein no 0.77
    16 CSW01_06390 thiol oxidoreductase no 0.77
    17 CSW01_11555 riboflavin synthase 0.68 0.76
    18 CSW01_01820 N-acetylmuramoyl-L-alanine amidase no 0.76
    19 CSW01_04820 serine hydroxymethyltransferase 0.76 0.76
    20 CSW01_16835 catabolite repressor/activator no 0.76

    Or look for negative cofitness