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  • Top cofit genes for CSW01_03275 from Vibrio cholerae E7946 ATCC 55056

    hybrid sensor histidine kinase/response regulator
    SEED: Chitin catabolic cascade sensor histidine kinase ChiS

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_17045 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta no 0.59
    2 CSW01_09005 regulator of ribonuclease activity A no 0.58
    3 CSW01_02730 diguanylate phosphodiesterase no 0.56
    4 CSW01_09595 peptidylprolyl isomerase no 0.55
    5 CSW01_08070 hypothetical protein no 0.54
    6 CSW01_10440 succinate dehydrogenase flavoprotein subunit no 0.54
    7 CSW01_07775 flagellar motor protein MotA no 0.54
    8 CSW01_10695 flagellin B no 0.53
    9 CSW01_05935 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase no 0.53
    10 CSW01_04655 HTH-type transcriptional regulator TreR no 0.53
    11 CSW01_08380 TIGR01621 family pseudouridine synthase no 0.52
    12 CSW01_02150 MSHA biogenesis protein MshB no 0.52
    13 CSW01_06710 DUF1460 domain-containing protein no 0.50
    14 CSW01_07900 hypothetical protein no 0.50
    15 CSW01_12700 RNA pseudouridine synthase no 0.50
    16 CSW01_18505 hypothetical protein no 0.50
    17 CSW01_04230 peptidase M66 no 0.49
    18 CSW01_12845 metalloprotease PmbA no 0.49
    19 CSW01_06540 metal-dependent phosphohydrolase no 0.49
    20 CSW01_00015 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE no 0.49

    Or look for negative cofitness