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  • Top cofit genes for CSW01_03265 from Vibrio cholerae E7946 ATCC 55056

    peptide ABC transporter substrate-binding protein
    SEED: (GlcNAc)2 ABC transporter, periplasmic substrate-binding protein
    KEGG: peptide/nickel transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_07825 LacI family transcriptional regulator no 0.54
    2 CSW01_08340 ABC transporter permease no 0.54
    3 CSW01_11415 phenolic acid decarboxylase no 0.50
    4 CSW01_16590 N-acetyltransferase no 0.50
    5 CSW01_11820 RimK family alpha-L-glutamate ligase no 0.49
    6 CSW01_08275 HAD family phosphatase no 0.48
    7 CSW01_18435 hypothetical protein no 0.46
    8 CSW01_13330 pilus assembly protein PilM no 0.46
    9 CSW01_11090 XRE family transcriptional regulator no 0.45
    10 CSW01_07925 lipid A modification system glycine--protein ligase AlmE no 0.44
    11 CSW01_07140 spermidine/putrescine ABC transporter substrate-binding protein no 0.44
    12 CSW01_08975 phage tail tape measure protein no 0.43
    13 CSW01_01110 YicC family protein no 0.42
    14 CSW01_19345 YccF domain-containing protein no 0.42
    15 CSW01_13540 malate dehydrogenase no 0.40
    16 CSW01_17240 2-aminoethylphosphonate--pyruvate aminotransferase no 0.40
    17 CSW01_03480 tRNA (adenosine(37)-N6)-methyltransferase TrmM no 0.40
    18 CSW01_04490 DUF533 domain-containing protein no 0.39
    19 CSW01_06620 EamA family transporter no 0.39
    20 CSW01_07865 ABC transporter permease no 0.38

    Or look for negative cofitness