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  • Top cofit genes for CSW01_03170 from Vibrio cholerae E7946 ATCC 55056

    ATP-dependent helicase HrpB
    SEED: ATP-dependent helicase HrpB
    KEGG: ATP-dependent helicase HrpB

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_06635 transporter no 0.66
    2 CSW01_17030 competence protein ComFB no 0.63
    3 CSW01_09695 LysE family translocator no 0.63
    4 CSW01_02840 DNA mismatch repair protein MutS no 0.62
    5 CSW01_01050 DUF3630 domain-containing protein no 0.62
    6 CSW01_01175 formamidopyrimidine-DNA glycosylase 0.57 0.61
    7 CSW01_01025 LysE family translocator 0.28 0.60
    8 CSW01_01060 ABC transporter ATP-binding protein no 0.58
    9 CSW01_01365 MBL fold hydrolase 0.29 0.58
    10 CSW01_03585 peptidylprolyl isomerase no 0.58
    11 CSW01_00945 XRE family transcriptional regulator no 0.58
    12 CSW01_13410 protein-export protein SecB no 0.57
    13 CSW01_02085 UTP--glucose-1-phosphate uridylyltransferase 0.44 0.57
    14 CSW01_02720 AraC family transcriptional regulator no 0.57
    15 CSW01_02655 type II secretion system protein no 0.57
    16 CSW01_03435 protease 0.28 0.56
    17 CSW01_13260 30S ribosomal protein S12 methylthiotransferase RimO 0.36 0.56
    18 CSW01_03190 hypothetical protein no 0.56
    19 CSW01_03155 RNA polymerase-binding transcription factor DksA no 0.55
    20 CSW01_13975 acetyl-CoA C-acyltransferase FadA 0.35 0.55

    Or look for negative cofitness