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  • Top cofit genes for CSW01_02840 from Vibrio cholerae E7946 ATCC 55056

    DNA mismatch repair protein MutS
    SEED: DNA mismatch repair protein MutS
    KEGG: DNA mismatch repair protein MutS

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_01390 mannose-6-phosphate isomerase, class I no 0.90
    2 CSW01_06085 urocanate hydratase no 0.90
    3 CSW01_01270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 0.76 0.90
    4 CSW01_11710 transcriptional regulator 0.32 0.90
    5 CSW01_01300 sugar ABC transporter 0.66 0.90
    6 CSW01_01295 ABC transporter permease 0.56 0.89
    7 CSW01_00215 potassium uptake protein TrkH 0.61 0.89
    8 CSW01_01255 acyltransferase no 0.88
    9 CSW01_01260 polysaccharide deacetylase no 0.88
    10 CSW01_09145 PTS fructose transporter subunit IIA no 0.88
    11 CSW01_01315 NAD-dependent alcohol dehydrogenase no 0.88
    12 CSW01_01275 phosphomannomutase/phosphoglucomutase 0.78 0.88
    13 CSW01_01420 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase 0.78 0.88
    14 CSW01_01345 glycosyl transferase family 1 0.58 0.88
    15 CSW01_06635 transporter no 0.88
    16 CSW01_01290 rfbG protein no 0.88
    17 CSW01_01285 perosamine synthetase 0.63 0.88
    18 CSW01_06025 phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.72 0.88
    19 CSW01_01310 long-chain fatty acid--CoA ligase no 0.88
    20 CSW01_01190 glycosyltransferase family 2 protein 0.68 0.88

    Or look for negative cofitness