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  • Top cofit genes for CSW01_02580 from Vibrio cholerae E7946 ATCC 55056

    DeoR/GlpR transcriptional regulator
    SEED: Transcriptional regulator of glmS gene, DeoR family

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_09170 histidine kinase no 0.61
    2 CSW01_04170 hypothetical protein no 0.57
    3 CSW01_02820 5'-nucleotidase SurE 0.44 0.55
    4 CSW01_02595 hemolysin 0.37 0.55
    5 CSW01_11355 phosphoribosylglycinamide formyltransferase 0.59 0.55
    6 CSW01_04050 LysR family transcriptional regulator no 0.54
    7 CSW01_01355 UDP-glucose 4-epimerase 0.44 0.54
    8 CSW01_09535 alanine dehydrogenase no 0.53
    9 CSW01_07995 galactose-1-epimerase no 0.53
    10 CSW01_01335 ISAs1 family transposase no 0.52
    11 CSW01_12340 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 0.41 0.52
    12 CSW01_18235 arginine decarboxylase 0.53 0.51
    13 CSW01_06775 4-hydroxyphenylpyruvate dioxygenase no 0.50
    14 CSW01_13620 aspartate ammonia-lyase 0.75 0.50
    15 CSW01_14630 type VI secretion system tip protein VgrG no 0.49
    16 CSW01_10760 glycine cleavage system transcriptional regulator no 0.49
    17 CSW01_11440 ribonuclease HII no 0.48
    18 CSW01_16260 prevent-host-death family protein no 0.48
    19 CSW01_01195 ADP-heptose--LPS heptosyltransferase I 0.57 0.48
    20 CSW01_11235 chemotaxis protein CheV 0.45 0.48

    Or look for negative cofitness