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  • Top cofit genes for CSW01_02495 from Vibrio cholerae E7946 ATCC 55056

    16S rRNA (uracil(1498)-N(3))-methyltransferase
    SEED: Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-)
    KEGG: ribosomal RNA small subunit methyltransferase E

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_03795 phosphate ABC transporter ATP-binding protein 0.56 0.46
    2 CSW01_05285 AsmA family protein 0.56 0.45
    3 CSW01_04175 SWIM zinc finger domain-containing protein no 0.45
    4 CSW01_17625 iron ABC transporter permease no 0.45
    5 CSW01_15930 hypothetical protein no 0.45
    6 CSW01_15015 anaerobic C4-dicarboxylate transporter 0.46 0.44
    7 CSW01_19280 amino acid ABC transporter permease no 0.44
    8 CSW01_19620 delta-VPH no 0.43
    9 CSW01_12765 outer membrane lipid asymmetry maintenance protein MlaD 0.50 0.43
    10 CSW01_08890 YafY family transcriptional regulator no 0.43
    11 CSW01_09215 tol-pal system-associated acyl-CoA thioesterase 0.58 0.43
    12 CSW01_03020 serine endoprotease DegQ 0.53 0.42
    13 CSW01_12780 hypothetical protein no 0.42
    14 CSW01_12785 calcium/sodium antiporter 0.52 0.40
    15 CSW01_01135 nucleoid occlusion factor SlmA 0.73 0.40
    16 CSW01_08520 hypothetical protein no 0.39
    17 CSW01_05145 endonuclease III 0.44 0.39
    18 CSW01_14365 methyl-accepting chemotaxis protein no 0.38
    19 CSW01_06860 siroheme synthase no 0.38
    20 CSW01_00710 DUF4145 domain-containing protein no 0.38

    Or look for negative cofitness