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  • Top cofit genes for CSW01_02445 from Vibrio cholerae E7946 ATCC 55056

    hypothetical protein
    SEED: Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock)
    KEGG: YggT family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_03310 peptidase M23 0.34 0.53
    2 CSW01_10775 AI-2E family transporter 0.27 0.49
    3 CSW01_06660 two-component sensor histidine kinase no 0.48
    4 CSW01_16575 acetyltransferase no 0.46
    5 CSW01_18075 nucleotide sugar dehydrogenase no 0.45
    6 CSW01_04695 AcrB/AcrD/AcrF family protein 0.59 0.44
    7 CSW01_06665 DNA-binding response regulator 0.55 0.44
    8 CSW01_17430 NADH oxidase no 0.44
    9 CSW01_18940 EamA family transporter no 0.44
    10 CSW01_15150 hypothetical protein no 0.44
    11 CSW01_08810 efflux RND transporter periplasmic adaptor subunit no 0.42
    12 CSW01_08915 ABC transporter permease no 0.42
    13 CSW01_16270 DUF3709 domain-containing protein no 0.41
    14 CSW01_18525 integrase no 0.41
    15 CSW01_09130 PTS fructose transporter subunit IIC no 0.41
    16 CSW01_10485 DUF2788 domain-containing protein no 0.40
    17 CSW01_17625 iron ABC transporter permease no 0.40
    18 CSW01_04870 ribosome silencing factor no 0.40
    19 CSW01_08530 RNA helicase no 0.40
    20 CSW01_09090 NYN domain-containing protein no 0.40

    Or look for negative cofitness