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  • Top cofit genes for CSW01_02440 from Vibrio cholerae E7946 ATCC 55056

    YggU family protein
    SEED: COG1872
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_14340 S9 family peptidase no 0.73
    2 CSW01_15345 XRE family transcriptional regulator no 0.73
    3 CSW01_16320 VOC family protein no 0.70
    4 CSW01_14555 type VI secretion system contractile sheath large subunit no 0.68
    5 CSW01_09535 alanine dehydrogenase no 0.67
    6 CSW01_11300 copper-exporting P-type ATPase A no 0.67
    7 CSW01_18780 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.16 0.66
    8 CSW01_06090 formimidoylglutamase no 0.65
    9 CSW01_07075 MFS transporter no 0.65
    10 CSW01_14125 1,4-alpha-glucan branching enzyme no 0.65
    11 CSW01_08990 glyoxalase no 0.64
    12 CSW01_01480 phosphogluconate dehydratase no 0.64
    13 CSW01_19550 chemotaxis protein CheA 0.60 0.64
    14 CSW01_11825 zinc transporter ZntB no 0.63
    15 CSW01_04020 vibriobactin biosynthesis amide synthase VibH no 0.63
    16 CSW01_07835 catalase-peroxidase no 0.63
    17 CSW01_02620 inovirus Gp2 family protein no 0.63
    18 CSW01_18285 4a-hydroxytetrahydrobiopterin dehydratase no 0.63
    19 CSW01_05180 tRNA-Asn no 0.62
    20 CSW01_17065 conjugal transfer protein TraF no 0.62

    Or look for negative cofitness