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  • Top cofit genes for CSW01_02265 from Vibrio cholerae E7946 ATCC 55056

    arginine repressor
    SEED: Arginine pathway regulatory protein ArgR, repressor of arg regulon
    KEGG: transcriptional regulator of arginine metabolism

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_18630 6-phosphogluconolactonase no 0.54
    2 CSW01_11535 thiamine-phosphate kinase no 0.50
    3 CSW01_08620 chromosome partition protein MukB no 0.49
    4 CSW01_02735 integrase no 0.48
    5 CSW01_01430 Zn(2+)-responsive transcriptional regulator no 0.47
    6 CSW01_11775 exodeoxyribonuclease V subunit alpha 0.35 0.47
    7 CSW01_04395 DNA repair protein RecN 0.31 0.47
    8 CSW01_04350 accessory colonization factor AcfD no 0.46
    9 CSW01_04330 accessory colonization factor AcfC no 0.46
    10 CSW01_04430 pilus assembly protein PilW no 0.45
    11 CSW01_17090 SPOR domain-containing protein no 0.45
    12 CSW01_13610 membrane protein FxsA no 0.45
    13 CSW01_00650 tyrosine recombinase XerC 0.31 0.45
    14 CSW01_01215 capsular biosynthesis protein no 0.45
    15 CSW01_03790 phosphate ABC transporter, permease protein PstA no 0.43
    16 CSW01_13340 DNA-binding transcriptional regulator OxyR 0.47 0.43
    17 CSW01_17625 iron ABC transporter permease no 0.43
    18 CSW01_12100 carbamoyl-phosphate synthase large chain 0.52 0.43
    19 CSW01_07355 DNA-binding protein no 0.42
    20 CSW01_08185 hydroxyneurosporene synthase no 0.42

    Or look for negative cofitness