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  • Top cofit genes for CSW01_01980 from Vibrio cholerae E7946 ATCC 55056

    transcriptional regulator Zur
    SEED: Zinc uptake regulation protein ZUR
    KEGG: Fur family transcriptional regulator, zinc uptake regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_02125 MSHA biogenesis protein MshM no 0.89
    2 CSW01_02160 MSHA pilin protein MshC no 0.88
    3 CSW01_02180 MSHA biogenesis protein MshQ no 0.88
    4 CSW01_02105 MSHA biogenesis protein MshI no 0.87
    5 CSW01_05845 HDOD domain-containing protein no 0.87
    6 CSW01_02460 type IV pili twitching motility protein PilT 0.59 0.86
    7 CSW01_02120 pilus (MSHA type) biogenesis protein MshL 0.71 0.86
    8 CSW01_02170 type II secretion system protein no 0.86
    9 CSW01_02110 MSHA biogenesis protein MshJ no 0.86
    10 CSW01_02130 MSHA biogenesis protein MshN no 0.86
    11 CSW01_02115 MSHA biogenesis protein MshK no 0.86
    12 CSW01_02140 type II secretion system F family protein no 0.85
    13 CSW01_02135 MSHA biogenesis protein MshE no 0.84
    14 CSW01_13635 thiol:disulfide interchange protein DsbD no 0.84
    15 CSW01_02175 MSHA biogenesis protein MshP no 0.84
    16 CSW01_00170 thiol:disulfide interchange protein DsbA 0.78 0.82
    17 CSW01_05070 N-acetylglucosamine-6-phosphate deacetylase 0.61 0.82
    18 CSW01_12605 3-isopropylmalate dehydratase large subunit 0.68 0.82
    19 CSW01_02530 D-erythrose-4-phosphate dehydrogenase 0.26 0.82
    20 CSW01_01975 chemotaxis protein CheX no 0.82

    Or look for negative cofitness