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  • Top cofit genes for CSW01_01845 from Vibrio cholerae E7946 ATCC 55056

    protease modulator HflK
    SEED: HflK protein
    KEGG: membrane protease subunit HflK

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_05340 LysR family transcriptional regulator 0.56 0.79
    2 CSW01_07190 transcriptional regulator FNR no 0.76
    3 CSW01_13425 fumarate reductase (quinol) flavoprotein subunit 0.70 0.75
    4 CSW01_13505 1,4-dihydroxy-2-naphthoate polyprenyltransferase 0.66 0.75
    5 CSW01_01435 transcriptional regulator CadC 0.71 0.73
    6 CSW01_01445 lysine decarboxylase 0.60 0.72
    7 CSW01_13430 succinate dehydrogenase/fumarate reductase iron-sulfur subunit no 0.68
    8 CSW01_10165 bifunctional acetaldehyde-CoA/alcohol dehydrogenase no 0.68
    9 CSW01_09350 formate C-acetyltransferase 0.65 0.67
    10 CSW01_09365 pyruvate formate lyase 1-activating protein 0.61 0.67
    11 CSW01_13440 fumarate reductase subunit D 0.57 0.65
    12 CSW01_01440 lysine:cadaverine antiporter no 0.65
    13 CSW01_01850 protease modulator HflC 0.99 0.62
    14 CSW01_11935 sodium:alanine symporter family protein 0.60 0.56
    15 CSW01_09390 SpoVR family protein 0.39 0.56
    16 CSW01_10385 Fe(2+) transporter permease subunit FeoB 0.69 0.55
    17 CSW01_00855 MexH family multidrug efflux RND transporter periplasmic adaptor subunit no 0.53
    18 CSW01_04660 PTS trehalose transporter subunit IIBC 0.48 0.52
    19 CSW01_00850 multidrug resistance protein 0.51 0.51
    20 CSW01_09515 Na+/H+ antiporter NhaB no 0.49

    Or look for negative cofitness