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  • Top cofit genes for CSW01_01710 from Vibrio cholerae E7946 ATCC 55056

    Rsd/AlgQ family anti-sigma factor
    SEED: Regulator of sigma D
    KEGG: regulator of sigma D

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_18285 4a-hydroxytetrahydrobiopterin dehydratase no 0.67
    2 CSW01_06090 formimidoylglutamase no 0.64
    3 CSW01_11960 autonomous glycyl radical cofactor GrcA 0.50 0.63
    4 CSW01_18780 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC 0.81 0.62
    5 CSW01_02835 RNA polymerase sigma factor RpoS 0.88 0.61
    6 CSW01_19545 chemotaxis protein CheW no 0.61
    7 CSW01_16320 VOC family protein no 0.60
    8 CSW01_09900 ribonuclease D 0.85 0.60
    9 CSW01_02515 transketolase no 0.60
    10 CSW01_14180 hypothetical protein no 0.60
    11 CSW01_13525 DNA-binding transcriptional regulator CytR 0.59 0.59
    12 CSW01_02620 inovirus Gp2 family protein no 0.59
    13 CSW01_18280 L-2,4-diaminobutyric acid acetyltransferase no 0.58
    14 CSW01_15955 DUF3709 domain-containing protein no 0.58
    15 CSW01_17690 NADH-dependent alcohol dehydrogenase no 0.58
    16 CSW01_01195 ADP-heptose--LPS heptosyltransferase I no 0.58
    17 CSW01_05480 hypothetical protein no 0.57
    18 CSW01_09965 DUF2989 domain-containing protein 0.34 0.57
    19 CSW01_04510 50S ribosomal protein L31 type B 0.45 0.56
    20 CSW01_12925 DUF2796 domain-containing protein no 0.55

    Or look for negative cofitness