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  • Top cofit genes for CSW01_01445 from Vibrio cholerae E7946 ATCC 55056

    lysine decarboxylase
    SEED: Lysine decarboxylase, inducible (EC 4.1.1.18)
    KEGG: lysine decarboxylase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_01440 lysine:cadaverine antiporter 0.52 0.92
    2 CSW01_07190 transcriptional regulator FNR 0.57 0.90
    3 CSW01_01435 transcriptional regulator CadC 0.60 0.89
    4 CSW01_04660 PTS trehalose transporter subunit IIBC 0.23 0.83
    5 CSW01_13430 succinate dehydrogenase/fumarate reductase iron-sulfur subunit 0.28 0.82
    6 CSW01_10165 bifunctional acetaldehyde-CoA/alcohol dehydrogenase 0.35 0.82
    7 CSW01_05340 LysR family transcriptional regulator no 0.82
    8 CSW01_09350 formate C-acetyltransferase 0.39 0.81
    9 CSW01_13505 1,4-dihydroxy-2-naphthoate polyprenyltransferase 0.47 0.79
    10 CSW01_09515 Na+/H+ antiporter NhaB no 0.79
    11 CSW01_09365 pyruvate formate lyase 1-activating protein 0.43 0.75
    12 CSW01_04930 phosphoenolpyruvate-protein phosphotransferase PtsI no 0.74
    13 CSW01_01845 protease modulator HflK 0.60 0.72
    14 CSW01_13425 fumarate reductase (quinol) flavoprotein subunit 0.32 0.71
    15 CSW01_17855 autoinducer 2 sensor kinase/phosphatase LuxQ no 0.70
    16 CSW01_10385 Fe(2+) transporter permease subunit FeoB no 0.69
    17 CSW01_12815 RNA polymerase sigma-54 factor 0.46 0.66
    18 CSW01_13440 fumarate reductase subunit D no 0.65
    19 CSW01_10180 Na+/H+ antiporter NhaC no 0.63
    20 CSW01_11705 MFS transporter 0.59 0.62

    Or look for negative cofitness