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  • Top cofit genes for CSW01_01405 from Vibrio cholerae E7946 ATCC 55056

    DNA-binding protein HU-alpha
    SEED: DNA-binding protein HU-alpha
    KEGG: DNA-binding protein HU-alpha

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_19575 ABC transporter permease no 0.76
    2 CSW01_13525 DNA-binding transcriptional regulator CytR 0.64 0.75
    3 CSW01_00215 potassium uptake protein TrkH no 0.73
    4 CSW01_06715 tripartite tricarboxylate transporter permease 0.22 0.73
    5 CSW01_18410 ABC transporter ATP-binding protein no 0.73
    6 CSW01_19230 maltoporin 0.78 0.73
    7 CSW01_01250 polymerase no 0.72
    8 CSW01_14125 1,4-alpha-glucan branching enzyme no 0.72
    9 CSW01_05180 tRNA-Asn no 0.72
    10 CSW01_09145 PTS fructose transporter subunit IIA no 0.72
    11 CSW01_18205 dehydratase no 0.72
    12 CSW01_14390 GGDEF domain-containing protein no 0.71
    13 CSW01_02835 RNA polymerase sigma factor RpoS 0.80 0.71
    14 CSW01_10360 peptidase M16 no 0.71
    15 CSW01_09860 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 0.61 0.71
    16 CSW01_07835 catalase-peroxidase no 0.71
    17 CSW01_14165 fucose 4-O-acetylase no 0.71
    18 CSW01_11275 NADPH-dependent ferric siderophore reductase 0.49 0.71
    19 CSW01_11825 zinc transporter ZntB no 0.70
    20 CSW01_01260 polysaccharide deacetylase no 0.70

    Or look for negative cofitness