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  • Top cofit genes for CSW01_01220 from Vibrio cholerae E7946 ATCC 55056

    capsular biosynthesis protein
    SEED: capsular polysaccharide biosynthesis protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_01205 wavE lipopolysaccharide synthesis family protein no 0.70
    2 CSW01_04235 hypothetical protein no 0.59
    3 CSW01_01100 PTS N-acetylmuramic acid EIIBC component no 0.59
    4 CSW01_18570 glycine C-acetyltransferase no 0.57
    5 CSW01_07770 MotA/TolQ/ExbB proton channel family protein no 0.55
    6 CSW01_11880 hypothetical protein no 0.55
    7 CSW01_04320 type 4 prepilin-like proteins leader peptide-processing enzyme no 0.54
    8 CSW01_06950 ATP-dependent RNA helicase HrpA no 0.53
    9 CSW01_01140 lipid A biosynthesis lauroyl acyltransferase no 0.53
    10 CSW01_04230 peptidase M66 no 0.52
    11 CSW01_11020 molecular chaperone DnaK no 0.52
    12 CSW01_05345 two-component system response regulator no 0.52
    13 CSW01_04310 pilus assembly protein no 0.51
    14 CSW01_08625 chromosome partition protein MukE no 0.51
    15 CSW01_04100 oxaloacetate decarboxylase subunit alpha no 0.50
    16 CSW01_02645 IS3 family transposase no 0.50
    17 CSW01_04345 accessory colonization factor AcfA no 0.50
    18 CSW01_02775 glycerol-3-phosphate acyltransferase 0.56 0.50
    19 CSW01_01225 capsular biosynthesis protein 0.60 0.49
    20 CSW01_08620 chromosome partition protein MukB no 0.48

    Or look for negative cofitness