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  • Top cofit genes for CSW01_01215 from Vibrio cholerae E7946 ATCC 55056

    capsular biosynthesis protein
    SEED: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_13410 protein-export protein SecB no 0.78
    2 CSW01_11690 hypothetical protein no 0.74
    3 CSW01_08815 AcrB/AcrD/AcrF family protein no 0.74
    4 CSW01_03190 hypothetical protein no 0.71
    5 CSW01_11535 thiamine-phosphate kinase no 0.71
    6 CSW01_04425 general secretion pathway protein GspH no 0.71
    7 CSW01_04585 tRNA 4-thiouridine(8) synthase ThiI no 0.70
    8 CSW01_11755 murein transglycosylase no 0.70
    9 CSW01_13965 YigZ family protein no 0.69
    10 CSW01_11870 DNA repair protein RadA no 0.69
    11 CSW01_04570 exodeoxyribonuclease 7 small subunit no 0.68
    12 CSW01_01355 UDP-glucose 4-epimerase no 0.68
    13 CSW01_01340 RfbT protein no 0.67
    14 CSW01_09240 Holliday junction branch migration DNA helicase RuvB no 0.67
    15 CSW01_01300 sugar ABC transporter no 0.67
    16 CSW01_00975 peptidase no 0.67
    17 CSW01_13470 transcriptional regulator no 0.67
    18 CSW01_01255 acyltransferase no 0.67
    19 CSW01_06025 phosphoribosylaminoimidazolesuccinocarboxamide synthase no 0.66
    20 CSW01_01420 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase no 0.66

    Or look for negative cofitness