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  • Top cofit genes for CSW01_01175 from Vibrio cholerae E7946 ATCC 55056

    formamidopyrimidine-DNA glycosylase
    SEED: Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
    KEGG: formamidopyrimidine-DNA glycosylase

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_09970 peptide-methionine (R)-S-oxide reductase no 0.74
    2 CSW01_01355 UDP-glucose 4-epimerase 0.38 0.74
    3 CSW01_01390 mannose-6-phosphate isomerase, class I no 0.74
    4 CSW01_01420 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase 0.31 0.73
    5 CSW01_00945 XRE family transcriptional regulator 0.22 0.73
    6 CSW01_13470 transcriptional regulator no 0.73
    7 CSW01_02840 DNA mismatch repair protein MutS 0.83 0.73
    8 CSW01_01300 sugar ABC transporter no 0.72
    9 CSW01_01255 acyltransferase no 0.72
    10 CSW01_04425 general secretion pathway protein GspH no 0.72
    11 CSW01_01190 glycosyltransferase family 2 protein no 0.71
    12 CSW01_01365 MBL fold hydrolase 0.23 0.71
    13 CSW01_01830 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 0.31 0.71
    14 CSW01_06635 transporter no 0.71
    15 CSW01_01270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase no 0.71
    16 CSW01_11270 non-ribosomal peptide synthetase no 0.71
    17 CSW01_06085 urocanate hydratase 0.64 0.70
    18 CSW01_11710 transcriptional regulator no 0.70
    19 CSW01_05430 GGDEF domain-containing protein no 0.70
    20 CSW01_07555 hypothetical protein no 0.70

    Or look for negative cofitness