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  • Top cofit genes for CSW01_01135 from Vibrio cholerae E7946 ATCC 55056

    nucleoid occlusion factor SlmA
    SEED: Transcriptional regulator SlmA, TetR family
    KEGG: TetR/AcrR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_19100 alkene reductase no 0.53
    2 CSW01_14810 tryptophanase leader peptide no 0.49
    3 CSW01_08905 MurR/RpiR family transcriptional regulator no 0.49
    4 CSW01_02520 iron-regulated virulence regulatory protein IrgB no 0.47
    5 CSW01_09000 transcriptional regulator no 0.46
    6 CSW01_08620 chromosome partition protein MukB no 0.46
    7 CSW01_17425 DUF2892 domain-containing protein no 0.46
    8 CSW01_01015 DNA helicase II 0.46 0.45
    9 CSW01_11565 transcriptional regulator NrdR no 0.45
    10 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 0.50 0.44
    11 CSW01_06930 sensor domain-containing diguanylate cyclase no 0.44
    12 CSW01_10075 endolytic transglycosylase MltG 0.41 0.43
    13 CSW01_06950 ATP-dependent RNA helicase HrpA 0.34 0.43
    14 CSW01_00650 tyrosine recombinase XerC 0.44 0.42
    15 CSW01_12250 site-specific tyrosine recombinase XerD 0.43 0.42
    16 CSW01_08625 chromosome partition protein MukE no 0.41
    17 CSW01_16980 hypothetical protein no 0.41
    18 CSW01_17990 ATPase RavA stimulator ViaA no 0.40
    19 CSW01_19260 methyl-accepting chemotaxis protein no 0.40
    20 CSW01_02495 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.47 0.40

    Or look for negative cofitness