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Cofit
Protein
Homologs
Top cofit genes for CSW01_01110 from
Vibrio cholerae E7946 ATCC 55056
YicC family protein
SEED: Protein YicC
Rank
Hit
Name
Description
Conserved?
Cofitness
1
CSW01
_10320
chemotaxis protein CheA
no
0.65
2
CSW01
_17855
autoinducer 2 sensor kinase/phosphatase LuxQ
no
0.62
3
CSW01
_13655
cation acetate symporter
no
0.58
4
CSW01
_15055
Bcr/CflA family drug resistance efflux transporter
0.70
0.57
5
CSW01
_10465
DUF1853 domain-containing protein
no
0.54
6
CSW01
_01440
lysine:cadaverine antiporter
no
0.53
7
CSW01
_03155
RNA polymerase-binding transcription factor DksA
0.78
0.53
8
CSW01
_14325
peptidase
0.76
0.53
9
CSW01
_01445
lysine decarboxylase
0.66
0.52
10
CSW01
_11535
thiamine-phosphate kinase
no
0.52
11
CSW01
_09515
Na+/H+ antiporter NhaB
0.27
0.52
12
CSW01
_03245
ABC transporter ATP-binding protein
no
0.51
13
CSW01
_04660
PTS trehalose transporter subunit IIBC
no
0.51
14
CSW01
_17530
anaerobic C4-dicarboxylate transporter DcuC
no
0.50
15
CSW01
_03190
hypothetical protein
0.62
0.50
16
CSW01
_03150
tRNA glutamyl-Q(34) synthetase GluQRS
no
0.50
17
CSW01
_12815
RNA polymerase sigma-54 factor
no
0.49
18
CSW01
_04930
phosphoenolpyruvate-protein phosphotransferase PtsI
0.57
0.49
19
CSW01
_17825
hypothetical protein
no
0.48
20
CSW01
_12750
BolA family transcriptional regulator
0.84
0.48
Or look for
negative cofitness