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  • Top cofit genes for CSW01_01065 from Vibrio cholerae E7946 ATCC 55056

    TonB-dependent siderophore receptor
    SEED: Ferrichrome-iron receptor
    KEGG: iron complex outermembrane recepter protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_14175 Anion transporter 0.59 0.66
    2 CSW01_13985 Bcr/CflA family drug resistance efflux transporter no 0.64
    3 CSW01_01030 AraC family transcriptional regulator 0.73 0.63
    4 CSW01_01380 D-2-hydroxyacid dehydrogenase no 0.61
    5 CSW01_00980 hypothetical protein no 0.61
    6 CSW01_01050 DUF3630 domain-containing protein no 0.61
    7 CSW01_13555 bifunctional aspartate kinase/homoserine dehydrogenase II 0.64 0.61
    8 CSW01_13590 DNA-binding response regulator 0.33 0.60
    9 CSW01_13975 acetyl-CoA C-acyltransferase FadA 0.69 0.60
    10 CSW01_13980 LysR family transcriptional regulator 0.24 0.60
    11 CSW01_02720 AraC family transcriptional regulator no 0.60
    12 CSW01_13310 type IV pilus secretin PilQ no 0.59
    13 CSW01_13385 acetylornithine deacetylase 0.31 0.59
    14 CSW01_13695 two-component system response regulator OmpR 0.48 0.58
    15 CSW01_04250 toxin coregulated pilus biosynthesis protein I no 0.58
    16 CSW01_13740 type II secretion system protein N no 0.58
    17 CSW01_03175 penicillin-binding protein 1B 0.85 0.58
    18 CSW01_01150 methyl-accepting chemotaxis protein 0.51 0.58
    19 CSW01_01035 gamma-glutamyltransferase 0.30 0.58
    20 CSW01_05430 GGDEF domain-containing protein no 0.58

    Or look for negative cofitness