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  • Top cofit genes for CSW01_01015 from Vibrio cholerae E7946 ATCC 55056

    DNA helicase II
    SEED: ATP-dependent DNA helicase UvrD/PcrA
    KEGG: DNA helicase II / ATP-dependent DNA helicase PcrA

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_05630 replication-associated recombination protein A 0.88 0.94
    2 CSW01_13680 DNA helicase RecG 0.93 0.90
    3 CSW01_09245 Holliday junction branch migration protein RuvA 0.82 0.88
    4 CSW01_02890 aspartate kinase no 0.83
    5 CSW01_02830 murein hydrolase activator NlpD 0.54 0.83
    6 CSW01_12250 site-specific tyrosine recombinase XerD 0.89 0.82
    7 CSW01_12335 outer membrane protein TolC 0.61 0.81
    8 CSW01_09240 Holliday junction branch migration DNA helicase RuvB 0.88 0.80
    9 CSW01_00650 tyrosine recombinase XerC 0.83 0.78
    10 CSW01_11870 DNA repair protein RadA 0.91 0.78
    11 CSW01_09605 endopeptidase La 0.65 0.74
    12 CSW01_00855 MexH family multidrug efflux RND transporter periplasmic adaptor subunit no 0.73
    13 CSW01_00850 multidrug resistance protein 0.42 0.73
    14 CSW01_04845 D-alanyl-D-alanine carboxypeptidase 0.67 0.73
    15 CSW01_11775 exodeoxyribonuclease V subunit alpha 0.88 0.72
    16 CSW01_12770 ABC transporter permease 0.73 0.71
    17 CSW01_03175 penicillin-binding protein 1B 0.81 0.70
    18 CSW01_01530 cyclic nucleotide-binding protein no 0.69
    19 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 0.28 0.68
    20 CSW01_13560 methylenetetrahydrofolate reductase 0.71 0.68

    Or look for negative cofitness