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  • Top cofit genes for CSW01_01005 from Vibrio cholerae E7946 ATCC 55056

    23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ
    SEED: Protein involved in catabolism of external DNA

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_05780 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase 0.57 0.53
    2 CSW01_19515 methyl-accepting chemotaxis protein no 0.52
    3 CSW01_14650 ribose import ATP-binding protein RbsA 0.31 0.52
    4 CSW01_01035 gamma-glutamyltransferase 0.75 0.50
    5 CSW01_18975 MFS transporter no 0.50
    6 CSW01_17705 two-component sensor histidine kinase no 0.49
    7 CSW01_09955 L-asparaginase 1 no 0.49
    8 CSW01_16250 C4-dicarboxylate ABC transporter no 0.49
    9 CSW01_19440 sodium/proline symporter PutP 0.28 0.48
    10 CSW01_00405 EamA family transporter 0.33 0.46
    11 CSW01_19595 DNA-binding response regulator 0.20 0.46
    12 CSW01_07710 methyl-accepting chemotaxis protein no 0.45
    13 CSW01_17440 hemolysin no 0.45
    14 CSW01_13180 isoaspartyl peptidase/L-asparaginase 0.32 0.44
    15 CSW01_14455 hypothetical protein no 0.44
    16 CSW01_18940 EamA family transporter no 0.44
    17 CSW01_02225 arginine deiminase no 0.43
    18 CSW01_08010 MFS transporter 0.27 0.43
    19 CSW01_14815 hypothetical protein no 0.43
    20 CSW01_15830 DUF3265 domain-containing protein no 0.42

    Or look for negative cofitness