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  • Top cofit genes for CSW01_00925 from Vibrio cholerae E7946 ATCC 55056

    ABC transporter permease
    SEED: Dipeptide transport system permease protein DppC (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_14050 ribosomal RNA small subunit methyltransferase G no 0.65
    2 CSW01_04265 toxin coregulated pilin no 0.61
    3 CSW01_08815 AcrB/AcrD/AcrF family protein no 0.60
    4 CSW01_14390 GGDEF domain-containing protein no 0.60
    5 CSW01_14045 ParA family protein no 0.59
    6 CSW01_04815 YitT family protein 0.32 0.59
    7 CSW01_10795 NAD(P)H:quinone oxidoreductase no 0.59
    8 CSW01_13980 LysR family transcriptional regulator no 0.58
    9 CSW01_03095 hypothetical protein no 0.58
    10 CSW01_01380 D-2-hydroxyacid dehydrogenase no 0.58
    11 CSW01_18400 outer membrane lipoprotein-sorting protein no 0.57
    12 CSW01_05260 hypothetical protein no 0.57
    13 CSW01_17575 mycothiol reductase no 0.57
    14 CSW01_13470 transcriptional regulator no 0.56
    15 CSW01_07620 DUF3305 domain-containing protein no 0.56
    16 CSW01_17295 molybdopterin molybdotransferase no 0.56
    17 CSW01_11600 aminoacyl-histidine dipeptidase no 0.55
    18 CSW01_01355 UDP-glucose 4-epimerase 0.43 0.55
    19 CSW01_05530 two-component system response regulator no 0.55
    20 CSW01_01365 MBL fold hydrolase no 0.55

    Or look for negative cofitness