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  • Top cofit genes for CSW01_00915 from Vibrio cholerae E7946 ATCC 55056

    nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein
    SEED: Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 CSW01_05265 methionine--tRNA ligase 0.35 0.63
    2 CSW01_15700 hypothetical protein no 0.60
    3 CSW01_16905 DedA family protein no 0.55
    4 CSW01_00920 ABC transporter permease 0.82 0.54
    5 CSW01_19010 methyl-accepting chemotaxis protein no 0.53
    6 CSW01_06875 7-cyano-7-deazaguanine synthase QueC 0.52 0.52
    7 CSW01_00950 transcriptional regulator no 0.52
    8 CSW01_14335 ATP-dependent helicase no 0.51
    9 CSW01_05860 response regulator no 0.51
    10 CSW01_16375 hypothetical protein no 0.51
    11 CSW01_00135 threonine ammonia-lyase, biosynthetic no 0.49
    12 CSW01_04290 toxin coregulated pilus biosynthesis protein D no 0.49
    13 CSW01_02950 sodium ion-translocating decarboxylase subunit beta no 0.48
    14 CSW01_14770 sodium:proton antiporter no 0.48
    15 CSW01_17405 efflux RND transporter periplasmic adaptor subunit no 0.48
    16 CSW01_17310 3-mercaptopyruvate sulfurtransferase 0.32 0.47
    17 CSW01_18435 hypothetical protein no 0.47
    18 CSW01_04310 pilus assembly protein no 0.47
    19 CSW01_01055 hypothetical protein no 0.47
    20 CSW01_05765 imidazole glycerol phosphate synthase subunit HisH no 0.47

    Or look for negative cofitness